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2008 All-Hands Meeting

March 20-21, 2008

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 8:30-8:45 a.m: Welcome, logistics, program update --- Doug Sheeley, NCRR

8:45 a.m: Overview of the NCDIR: from Proteomic Data to Macromolecular Structures ---

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JohnAitchison, Institute for Systems Biology
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JohnAitchison, Institute for Systems Biology
  9:10 a.m: Late Processing and Nuclear Export of Large Ribonucleoprotein Complexes --- MarleneOeffinger, Rockefeller University

9:35 a.m: IMP:Software for Integrative Determination of Macromolecular Assembly Structures ---

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  10:00 a.m: Revealing the HIV-Host Interactome --- Mark Muesing, Aaron Diamond AIDS Research Center
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  8:00-8:30 a.m: Registration and Light Refreshments
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8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. --- AlanWaggoner, Carnegie Mellon University
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8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. --- AlanWaggoner, Carnegie Mellon University
  8:55 a.m. Development of protease biosensors. --- PeterBerget and Crystal Falco, Carnegie Mellon University
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META FILEATTACHMENT attr="" autoattached="1" comment="John Carson" date="1208279763" name="John_Carson.pdf" path="John_Carson.pdf" size="451123" user="Main.KemBoddie" version="1"
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META FILEATTACHMENT attr="" autoattached="1" comment="Alan Waggoner" date="1208958746" name="Alan_Wagonner.pdf" path="Alan_Wagonner.pdf" size="5951732" user="Main.KemBoddie" version="1"
 
META FILEATTACHMENT attr="" autoattached="1" comment="Marlene_Oeffinger" date="1208279201" name="Marlene_Oeffinger.pdf" path="Marlene_Oeffinger.pdf" size="1937883" user="Main.KemBoddie" version="1"

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2008 All-Hands Meeting

March 20-21, 2008

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2008 All-Hands Meeting March 20-21, 2008 Bethesda Marriott
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2008 All-Hands Meeting

March 20-21, 2008

Bethesda Marriott, Bethesda MD

 
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8:30-8:45 a.m. Welcome, logistics, program update Doug Sheeley, NCRR
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8:45 a.m. Overview of the NCDIR: from Proteomic Data to Macromolecular Structures
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8:45 a.m: Overview of the NCDIR: from Proteomic Data to Macromolecular Structures ---
  JohnAitchison, Institute for Systems Biology
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9:10 a.m. Late Processing and Nuclear Export of Large Ribonucleoprotein Complexes
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9:10 a.m: Late Processing and Nuclear Export of Large Ribonucleoprotein Complexes ---
  MarleneOeffinger, Rockefeller University
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9:35 a.m. IMP: Software for Integrative Determination of Macromolecular Assembly Structures
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9:35 a.m: IMP:Software for Integrative Determination of Macromolecular Assembly Structures ---
  DanielRussel, UCSF
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10:00 a.m. Revealing the HIV-Host Interactome
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10:00 a.m: Revealing the HIV-Host Interactome ---
  Mark Muesing, Aaron Diamond AIDS Research Center
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10:55 a.m. Identification of Novel Proteolytic Pathways with Proteomics
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10:55 a.m: Identification of Novel Proteolytic Pathways with Proteomics ---
  GuySalvesen, The Burnham Institute for Medical Research
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11:20 a.m. Applying the CPP methodologies to anti-viral and anti-bacterial drug design
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11:20 a.m: Applying the CPP methodologies to anti-viral and anti-bacterial drug design ---
  AlexStrongin, The Burnham Institute for Medical Research
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11:45 a.m. Proteolytic Pathways in Progression of Pre-Malignant Breast Disease
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11:45 a.m: Proteolytic Pathways in Progression of Pre-Malignant Breast Disease ---
  BonnieSloane, Wayne State University
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12:10 p.m. Predicting unknown Proteolytic Pathways: Charting new Research Directions
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12:10 p.m: Predicting unknown Proteolytic Pathways: Charting new Research Directions ---
  Jeffrey W. Smith, The Burnham Institute for Medical Research
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12:35- 2:00 p.m. Working Lunch for Registered Participants: Discussion of the TCNP Program: How can we improve the program going forward?
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12:35- 2:00 p.m: Working Lunch for Registered Participants: Discussion of the TCNP Program: --- How can we improve the program going forward?
 
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2:00 p.m. Massive mutagenesis of histones H3 and H4
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2:00 p.m: Massive mutagenesis of histones H3 and H4 ---
  Jef Boeke, Johns Hopkins
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2:25 p.m: Global analysis of protein functions using a protein chip approach ---
  Heng Zhu, Johns Hopkins
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2:50 p.m. Multi-scale systems analysis of chromatin structure
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2:50 p.m: Multi-scale systems analysis of chromatin structure ---
  Joel Bader, Johns Hopkins

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2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008

Agenda

Thursday, March 20

3:15 p.m. Structural and biochemical analysis of the histone demethylase LSD1

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3:15 p.m: Structural and biochemical analysis of the histone demethylase LSD1 ---
  Hongtao Yu, University of Texas Southwestern Medical Center
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3:40-4:10 p.m: Break, Poster Viewing
 
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4:10 p.m. Application of TCNP technologies to understand polarity in cell-cell fusion
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4:10 p.m: Application of TCNP technologies to understand polarity in cell-cell fusion ---
  William Mohler, UCHC
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4:35 p.m. Bringing new TCNP technologies to the education and research communities
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4:35 p.m: Bringing new TCNP technologies to the education and research communities ---
  Raquell Holmes, UCHC
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5:00-7:00 p.m. Adjourn for Dinner (on your own)

7:00-9:30 p.m. Poster Session

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8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. AlanWaggoner, Carnegie Mellon University
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8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. --- AlanWaggoner, Carnegie Mellon University
 
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8:55 a.m. Development of protease biosensors.
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8:55 a.m. Development of protease biosensors. ---
  PeterBerget and Crystal Falco, Carnegie Mellon University
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9:20 a.m. Biosensors for endocytosis and exocytosis based on novel Fluorogen Activating Peptides and Fluorogens
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9:20 a.m. Biosensors for endocytosis and exocytosis based on novel Fluorogen Activating Peptides and Fluorogens ---
  MarcelBruchez, Greg Fisher, Anmol Grover, John Holleran, Sally Adler, James Fitzpatrick, Jon Jarvik, Paul Johnston and John Lazo, Carnegie Mellon University and University of Pittsburgh
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9:45 a.m. Analysis of microtubule ends in living regulatory mutants
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9:45 a.m. Analysis of microtubule ends in living regulatory mutants ---
  EstelleGlory, Rebecca Webb, Robert F. Murphy and Brooke McCartney Carnegie Mellon University
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10:30 a.m. Applications of scFv based biosensors in immunology.
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10:30 a.m. Applications of scFv based biosensors in immunology ---
  Russell Salter and SimonWatkins, University of Pittsburgh
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10:55 a.m. "New technologies for modeling stochastic processes and diffusion in crowded spaces" ---
  BorisSlepchenko,UCHC
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11:20 a.m. A new method to measure translational output from individual RNA molecules in live neurons using single molecule imaging JohnCarson, UCHC
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11:20 a.m. A new method to measure translational output from individual RNA molecules in live neurons using single molecule imaging --- JohnCarson, UCHC
 
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11:45 a.m. Signaling platforms: manipulating the local concentration of signaling proteins in living cells
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11:45 a.m. Signaling platforms: manipulating the local concentration of signaling proteins in living cells ---
  BruceMayer, UCHC
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12:10-1:30 p.m. Working Lunch for Registered Participants
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12:10-1:30 p.m. Working Lunch for Registered Participants ---
  Discussion of Inter-TCNP Collaboration

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Integration of PSLID and SLIF with “Virtual Cell”
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Integration of PSLID and SLIF with “Virtual Cell” ---
  Robert F. Murphy, Les Loew and Ion Moraru Carnegie Mellon University and University of Connecticut Virtual geometries for spatial modeling of networks and pathways Ion Moraru, UCHC

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2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008

Agenda

Friday, March 21

 
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1:30 p.m. Regulation of spatial domains of signaling components by cell shape
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1:30 p.m. Regulation of spatial domains of signaling components by cell shape ---
  Susana Neves, Mount Sinai School of Medicine

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1:55 p.m. Integrating Virginia Tech and UCHC Technologies for Cell Cycle Modeling
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1:55 p.m. Integrating Virginia Tech and UCHC Technologies for Cell Cycle Modeling ---
  CliffShaffer, Virginia Tech
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2:20 p.m. TBD ---
  Ileana Cristea, Princeton University
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2:45 p.m. Analysis of signaling pathways in cancers using quantitative mass spectrometry
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2:45 p.m. Analysis of signaling pathways in cancers using quantitative mass spectrometry ---
  Akhilesh Pandey, Johns Hopkins and Harold Varmus and Ugay Guha, Sloan Kettering

3:10 p.m. Closing Remarks

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2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008
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2008 All-Hands Meeting March 20-21, 2008 Bethesda Marriott
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  Doug Sheeley, NCRR

8:45 a.m. Overview of the NCDIR: from Proteomic Data to Macromolecular Structures

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9:35 9:35 a.m. IMP: Software for Integrative Determination of Macromolecular Assembly Structures Daniel Russel, UCSF
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9:35 a.m. IMP: Software for Integrative Determination of Macromolecular Assembly Structures DanielRussel, UCSF
  10:00 a.m. Revealing the HIV-Host Interactome Mark Muesing, Aaron Diamond AIDS Research Center
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 10:25-10:55 a.m. Break, Poster Viewing

10:55 a.m. Identification of Novel Proteolytic Pathways with Proteomics

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  11:45 a.m. Proteolytic Pathways in Progression of Pre-Malignant Breast Disease
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Bonnie Sloane, Wayne State University
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BonnieSloane, Wayne State University
  12:10 p.m. Predicting unknown Proteolytic Pathways: Charting new Research Directions Jeffrey W. Smith, The Burnham Institute for Medical Research
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  8:00-8:30 a.m. Registration and Light Refreshments
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8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. Alan Waggoner, Carnegie Mellon University
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8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. AlanWaggoner, Carnegie Mellon University
  8:55 a.m. Development of protease biosensors.
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Peter Berget and Crystal Falco, Carnegie Mellon University
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PeterBerget and Crystal Falco, Carnegie Mellon University
  9:20 a.m. Biosensors for endocytosis and exocytosis based on novel Fluorogen Activating Peptides and Fluorogens
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Marcel Bruchez, Greg Fisher, Anmol Grover, John Holleran, Sally Adler, James Fitzpatrick, Jon Jarvik, Paul Johnston and John Lazo, Carnegie Mellon University and University of Pittsburgh
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MarcelBruchez, Greg Fisher, Anmol Grover, John Holleran, Sally Adler, James Fitzpatrick, Jon Jarvik, Paul Johnston and John Lazo, Carnegie Mellon University and University of Pittsburgh
  9:45 a.m. Analysis of microtubule ends in living regulatory mutants
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Estelle Glory, Rebecca Webb, Robert F. Murphy and Brooke McCartney
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EstelleGlory, Rebecca Webb, Robert F. Murphy and Brooke McCartney
  Carnegie Mellon University

10:10-10:30 am Break, Poster Viewing

10:30 a.m. Applications of scFv based biosensors in immunology.

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Russell Salter and Simon Watkins, University of Pittsburgh
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Boris Slepchenko, UCHC
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BorisSlepchenko,UCHC
 
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  Susana Neves, Mount Sinai School of Medicine

1:55 p.m. Integrating Virginia Tech and UCHC Technologies for Cell Cycle Modeling

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  2:20 p.m. TBD Ileana Cristea, Princeton University

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2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008
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  John Carson, UCHC

11:45 a.m. Signaling platforms: manipulating the local concentration of signaling proteins in living cells

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11:45 a.m. Signaling platforms: manipulating the local concentration of signaling proteins in living cells

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2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008

Agenda

Thursday, March 20

8:00-8:30 a.m. Registration and Light Refreshments

8:30-8:45 a.m. Welcome, logistics, program update Doug Sheeley, NCRR

8:45 a.m. Overview of the NCDIR: from Proteomic Data to Macromolecular Structures John Aitchison, Institute for Systems Biology

9:10 a.m. Late Processing and Nuclear Export of Large Ribonucleoprotein Complexes Marlene Oeffinger, Rockefeller University

9:35 9:35 a.m. IMP: Software for Integrative Determination of Macromolecular Assembly Structures Daniel Russel, UCSF

10:00 a.m. Revealing the HIV-Host Interactome Mark Muesing, Aaron Diamond AIDS Research Center

10:25-10:55 a.m. Break, Poster Viewing

10:55 a.m. Identification of Novel Proteolytic Pathways with Proteomics Guy Salvesen, The Burnham Institute for Medical Research

11:20 a.m. Applying the CPP methodologies to anti-viral and anti-bacterial drug design Alex Strongin, The Burnham Institute for Medical Research

11:45 a.m. Proteolytic Pathways in Progression of Pre-Malignant Breast Disease Bonnie Sloane, Wayne State University

12:10 p.m. Predicting unknown Proteolytic Pathways: Charting new Research Directions Jeffrey W. Smith, The Burnham Institute for Medical Research

12:35- 2:00 p.m. Working Lunch for Registered Participants: Discussion of the TCNP Program: How can we improve the program going forward?

2:00 p.m. Massive mutagenesis of histones H3 and H4 Jef Boeke, Johns Hopkins

2:25 p.m. Global analysis of protein functions using a protein chip approach Heng Zhu, Johns Hopkins

2:50 p.m. Multi-scale systems analysis of chromatin structure Joel Bader, Johns Hopkins

2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008

Agenda

Thursday, March 20

3:15 p.m. Structural and biochemical analysis of the histone demethylase LSD1 Hongtao Yu, University of Texas Southwestern Medical Center

3:40-4:10 p.m. Break, Poster Viewing

4:10 p.m. Application of TCNP technologies to understand polarity in cell-cell fusion William Mohler, UCHC

4:35 p.m. Bringing new TCNP technologies to the education and research communities Raquell Holmes, UCHC

5:00-7:00 p.m. Adjourn for Dinner (on your own)

7:00-9:30 p.m. Poster Session

2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008

Agenda

Friday, March 21

8:00-8:30 a.m. Registration and Light Refreshments

8:30 a.m. Biosensor platform development at the Fluorescent Probes and Imaging TCNP. Alan Waggoner, Carnegie Mellon University

8:55 a.m. Development of protease biosensors. Peter Berget and Crystal Falco, Carnegie Mellon University

9:20 a.m. Biosensors for endocytosis and exocytosis based on novel Fluorogen Activating Peptides and Fluorogens Marcel Bruchez, Greg Fisher, Anmol Grover, John Holleran, Sally Adler, James Fitzpatrick, Jon Jarvik, Paul Johnston and John Lazo, Carnegie Mellon University and University of Pittsburgh

9:45 a.m. Analysis of microtubule ends in living regulatory mutants Estelle Glory, Rebecca Webb, Robert F. Murphy and Brooke McCartney Carnegie Mellon University

10:10-10:30 am Break, Poster Viewing

10:30 a.m. Applications of scFv based biosensors in immunology. Russell Salter and Simon Watkins, University of Pittsburgh

10:55 a.m. "New technologies for modeling stochastic processes and diffusion in crowded spaces" Boris Slepchenko, UCHC

11:20 a.m. A new method to measure translational output from individual RNA molecules in live neurons using single molecule imaging John Carson, UCHC

11:45 a.m. Signaling platforms: manipulating the local concentration of signaling proteins in living cells Bruce Mayer, UCHC

12:10-1:30 p.m. Working Lunch for Registered Participants Discussion of Inter-TCNP Collaboration

Integration of PSLID and SLIF with “Virtual Cell” Robert F. Murphy, Les Loew and Ion Moraru Carnegie Mellon University and University of Connecticut Virtual geometries for spatial modeling of networks and pathways Ion Moraru, UCHC

2008 All-Hands Meeting Bethesda Marriott March 20-21, 2008

Agenda

Friday, March 21

1:30 p.m. Regulation of spatial domains of signaling components by cell shape Susana Neves, Mount Sinai School of Medicine

1:55 p.m. Integrating Virginia Tech and UCHC Technologies for Cell Cycle Modeling Cliff Shaffer, Virginia Tech

2:20 p.m. TBD Ileana Cristea, Princeton University

2:45 p.m. Analysis of signaling pathways in cancers using quantitative mass spectrometry Akhilesh Pandey, Johns Hopkins and Harold Varmus and Ugay Guha, Sloan Kettering

3:10 p.m. Closing Remarks

3:15 p.m. Adjourn

 
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-- RaquellHOlmes - 15 Apr 2008
 
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-- RaquellHOlmes - 15 Apr 2008 \ No newline at end of file

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Revision 12008-04-15 - RaquellHOlmes

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Add text and then use attach button at the bottom of the page to link attachments.

-- RaquellHOlmes - 15 Apr 2008

 
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