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The Virtual Cell SBML Converter

  • VcmlSbmlConverter is a script used to convert SBML files to VCML and vice versa (import SBML files to VCML and export VCML files to SBML)

  • This code is based on VCell_5.2 (Eclipse svn://code/vcell/branches/VCell_5.2 ; Revision : 13104)

  • This version uses libSbml version 5.5.0.

  • Java version 1.6

  • NOTE: The converter does not support export to SBML spatial extension at this point.

  • Please read the README file in the attachments for instructions on how to run the SbmlConverter.

  • You can also access the required folder from this dropbox location:

https://www.dropbox.com/sh/c2buegjkt0moqot/QBpoO2px6H

Topic attachments
I Attachment Action Size Date Who Comment
Texttxt README_May2013.txt manage 4.8 K 2013-05-07 - 16:54 AnuradhaLakshminarayana README file to run VcmlSBMLConverter
Compressed Zip archivezip SBMLConverter.zip manage 50208.3 K 2013-05-07 - 16:52 AnuradhaLakshminarayana VCmlSbmlConverter zip file
Compressed Zip archivezip vcell_src.zip manage 5257.6 K 2013-05-07 - 16:53 AnuradhaLakshminarayana Vcell src corresponding to SbmlConverter version
Topic revision: r26 - 2013-05-07 - 22:41:04 - AnuradhaLakshminarayana
 
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